Publications

2025

Venado RE, Wilker J, Pankievicz V, Infante V, MacIntyre A, Wolf E, Vela S, Robbins F, Fernandes-Júnior PI, Vermerris W, Ané JM. Mucilage produced by aerial roots hosts diazotrophs that provide nitrogen in Sorghum bicolor (2025) PLOS Biology (in press). DOI: 10.1371/journal.pbio.3003037

Venkataraman M, Infante V, Sabat G, Sanos-Giles K, Ané JM, Pfleger BF. A novel membrane-associated protein aids bacterial colonization of maize. ACS Synth Biol (2025) 14, 1, 206–215. DOI:10.1021/acssynbio.4c00489

2024

Wolf ESA, Vela S, Wilker J, Davis A, Robert M, Infante V, et al. Identification of genetic and environmental factors influencing aerial root traits that support biological nitrogen fixation in sorghum. G3: Genes|Genomes|Genetics. (2024) 14. DOI:10.1093/g3journal/jkad285

2023

Venkataraman M, Ynigez-Gutierrez A, Infante V, MacIntyre A, Fernandes-Júnior P, Ané JM, Pfleger B. A Synthetic Biology Toolbox for Nitrogen-Fixing Soil Microbes. ACS Synthetic Biology (2023) 12, 3623–3634. DOI: 10.1021/acssynbio.3c00414

McCalla SG, Fotuhi Siahpirani A, Li J, Pyne S, Stone M, Periyasamy V, et al. Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq data. G3: Genes|Genomes|Genetics. (2023) 13. DOI:10.1093/g3journal/jkad004

Zhang S, Pyne S, Pietrzak S, Halberg S, McCalla SG, Siahpirani AF, et al. Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasets. Nat Commun. (2023) 14: 3064. DOI: /10.1038/s41467-023-38637-9